STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV08924.1Transcriptional regulator; Pfam:pfam01037 AsnC family. (156 aa)    
Predicted Functional Partners:
ALV07323.1
Transcriptional regulator, AsnC family; Pfam:pfam13412 Winged helix-turn-helix DNA-binding.
  
     0.770
ALV04970.1
Pfam:pfam01037 AsnC family.
  
     0.769
ALV05398.1
Pfam:pfam01037 AsnC family.
  
     0.766
ALV05157.1
Transcriptional regulator; Pfam:pfam01037 AsnC family.
  
     0.759
ALV05170.1
AsnC family transcriptional regulator; Pfam:pfam13412 Winged helix-turn-helix DNA-binding.
  
     0.733
ALV08923.1
Pfam:pfam03435 Saccharopine dehydrogenase.
 
     0.632
ALV08921.1
Hypothetical protein; Pfam:pfam07063 Domain of unknown function (DUF1338).
  
    0.513
ALV08922.1
Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
    0.496
ALV08920.1
Putative D-lactate dehydrogenase; Pfam:pfam01565 FAD binding domain.
       0.490
ALV08925.1
Hypothetical protein.
       0.447
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.