STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV08962.1Amino acid ABC transporter substrate-binding protein; Pfam:pfam13458 Periplasmic binding protein. (418 aa)    
Predicted Functional Partners:
ALV08960.1
Pfam:pfam00005 ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.983
ALV05091.1
ABC transporter-related protein; Pfam:pfam00005 ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.953
ALV08961.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.933
ALV08959.1
Amino acid ABC transporter ATPase; Pfam:pfam00005 ABC transporter.
 
  
 0.910
ALV07265.1
ABC transporter ATP-binding protein; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.839
ALV07264.1
Putative high-affinity branched-chain amino acid ABC transporter ATP binding protein LivG; Pfam:pfam00005 ABC transporter.
 
  
 0.833
ALV07266.1
LIV-I protein H; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.829
ALV05090.1
Inner-membrane translocator; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.816
ALV05092.1
ABC transporter-related protein; Pfam:pfam00005 ABC transporter.
 
  
 0.806
ALV07263.1
Pfam:pfam00005 ABC transporter.
 
  
 0.799
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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