STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV09023.1Pfam:pfam01337 Barstar (barnase inhibitor). (131 aa)    
Predicted Functional Partners:
ALV09022.1
Guanyl-specific ribonuclease Sa-like protein; Pfam:pfam00545 ribonuclease.
 
 
 0.972
ALV04865.1
Pfam:pfam12091 Protein of unknown function (DUF3567).
  
     0.773
ALV08080.1
Hypothetical protein.
  
     0.768
ALV06619.1
Putative membrane protein.
  
     0.762
ALV06275.1
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Pfam:pfam11943 Protein of unknown function (DUF3460).
  
     0.761
ALV05427.1
Putative acetyltransferase.
  
     0.751
ALV05046.1
Putative nucleic acid-binding protein.
  
     0.750
ALV05844.1
Putative transmembrane protein; Pfam:pfam07264 Etoposide-induced protein 2.
  
     0.748
ALV08605.1
Hypothetical protein.
  
     0.744
ALV06154.1
Hypothetical protein.
  
     0.739
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.