STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV05133.1Beta-hydroxypalmitic acid methyl ester hydrolase. (469 aa)    
Predicted Functional Partners:
ALV05134.1
Putative outer membrane protein W; Pfam:pfam03922 OmpW family.
       0.689
ALV06101.1
Hypothetical protein.
  
     0.566
ALV05135.1
Peptidase M22; Pfam:pfam00814 Glycoprotease family.
       0.553
ALV05136.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
       0.539
ALV05137.1
DNA polymerase-like protein; Pfam:pfam03167 Uracil DNA glycosylase superfamily.
       0.539
ALV05138.1
Cyclic di-GMP phosphodiesterase Gmr; Pfam:pfam00563 EAL domain.
       0.537
ALV05139.1
Pfam:pfam02636 Putative S-adenosyl-L-methionine-dependent methyltransferase.
       0.535
ALV05643.1
Multimeric flavodoxin WrbA; Pfam:pfam03358 NADPH-dependent FMN reductase.
 
     0.460
ALV06958.1
S-layer protein.
  
     0.438
ALV05131.1
Translation factor Sua5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.436
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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