STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV05204.1Cytochrome c, mono-and diheme variants family; Pfam:pfam00034 Cytochrome c. (466 aa)    
Predicted Functional Partners:
ALV05203.1
Pfam:pfam00034 Cytochrome c.
  
 0.949
ALV05786.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.943
ALV05787.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.862
ALV07761.1
Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO.
  
 
 0.857
ALV07762.1
Putative cytochrome C oxidase (Subunit I) transmembrane protein; Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.845
ALV07487.1
Choline dehydrogenase-related flavoprotein; Pfam:pfam05199 GMC oxidoreductase.
 
 
 0.826
ALV05654.1
Pfam:pfam00510 Cytochrome c oxidase subunit III.
  
 
 0.800
ALV08546.1
Pfam:pfam00510 Cytochrome c oxidase subunit III.
  
 
 0.800
ALV05841.1
Hypothetical protein; Pfam:pfam10282 Lactonase, 7-bladed beta-propeller.
 
 
 0.736
ALV07343.1
Pfam:pfam00034 Cytochrome c.
  
 0.716
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.