STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV05322.1Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (392 aa)    
Predicted Functional Partners:
ALV08790.1
Propionyl-CoA carboxylase; Pfam:pfam01039 Carboxyl transferase domain.
 
 
 0.978
ALV08517.1
Hypothetical protein; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.966
ALV05379.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
 
 0.963
ALV08782.1
3-methylcrotonoyl-CoA carboxylase subunit alpha; Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain.
 
 0.927
ALV05882.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
 0.913
ALV09273.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
  
 
0.913
ALV05683.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.898
ALV05948.1
Electron transfer flavoprotein, alpha subunit; Pfam:pfam00766 Electron transfer flavoprotein FAD-binding domain.
 
 0.893
ALV05947.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
 
 
 0.800
ALV08787.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.790
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.