STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV05337.1Aldehyde oxidase; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase. (787 aa)    
Predicted Functional Partners:
ALV05339.1
(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain.
 0.999
ALV07172.1
(2Fe-2S)-binding domain protein; Pfam:pfam01799 [2Fe-2S] binding domain.
 0.998
ALV05338.1
Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 0.998
ALV07173.1
Xanthine dehydrogenase; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 0.995
ALV09205.1
(2Fe-2S)-binding protein; Pfam:pfam01799 [2Fe-2S] binding domain.
 
 0.949
ALV08413.1
Xanthine dehydrogenase small subunit; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
  
  0.927
ALV08794.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain.
 
 0.920
ALV07174.1
Xanthine dehydrogenase; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase.
  
  
 
0.918
ALV08414.1
Xanthine dehydrogenase, molybdopterin binding subunit; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase.
  
  
 
0.909
ALV09214.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain.
 
 0.907
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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