STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV05446.1General secretion pathway protein GspI; Pfam:pfam02501 Type II secretion system (T2SS), protein I. (134 aa)    
Predicted Functional Partners:
ALV05444.1
Pfam:pfam03934 Type II secretion system (T2SS), protein K.
 
 
 0.997
ALV05445.1
General secretion pathway protein GspJ; Pfam:pfam11612 Type II secretion system (T2SS), protein J.
 
 
 0.976
ALV05448.1
General secretion pathway protein GspG; Pfam:pfam08334 Type II secretion system (T2SS), protein G.
 
  
 0.935
ALV05440.1
Pfam:pfam00263 Bacterial type II and III secretion system protein.
 
  
 0.907
ALV05447.1
General secretion pathway protein GspH.
  
  
 0.884
ALV05441.1
Putative general secretory pathway N transmembrane protein.
 
   
 0.877
ALV05438.1
Pfam:pfam00482 Type II secretion system (T2SS), protein F.
 
  
 0.866
ALV05439.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.826
ALV05443.1
Putative general secretion pathway protein L GspL; Pfam:pfam12693 GspL periplasmic domain.
 
  
 0.825
ALV06862.1
Pfam:pfam00263 Bacterial type II and III secretion system protein.
 
  
 0.769
Your Current Organism:
Roseateles depolymerans
NCBI taxonomy Id: 76731
Other names: CCUG 52219, DSM 11813, R. depolymerans, proteobacterium DSM11813, proteobacterium DSM11814, strain 61A
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