STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFC84621.1Antirepressor regulating drug resistance protein; PFAM: BlaR1 peptidase M56. (593 aa)    
Predicted Functional Partners:
AFC87604.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, TIGR02999 family.
  
     0.537
AFC86584.1
Enterochelin esterase-like enzyme; PFAM: Putative esterase.
  
     0.514
AFC87342.1
ABC-type Na+ efflux pump, permease component.
  
     0.431
AFC85166.1
Putative aminopeptidase; PFAM: PA domain; Peptidase family M28.
  
     0.407
AFC87282.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Frateuria aurantia
NCBI taxonomy Id: 767434
Other names: F. aurantia DSM 6220, Frateuria aurantia DSM 6220, Frateuria aurantia IFO 3245, Frateuria aurantia str. DSM 6220, Frateuria aurantia strain DSM 6220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.