Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AFC85275.1Polyketide cyclase / dehydrase and lipid transport. (457 aa)    
Predicted Functional Partners:
AFC84601.1
Hypothetical protein; PFAM: TraB family.
  
     0.771
AFC84712.1
Putative methyltransferase.
  
     0.739
AFC85298.1
Hypothetical protein.
  
     0.721
AFC85821.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase.
  
     0.706
AFC85605.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
     0.701
AFC87090.1
Ankyrin repeat-containing protein.
  
     0.671
AFC85941.1
PFAM: Protein of unknown function (DUF3574).
  
    0.667
AFC85290.1
Negative regulator of beta-lactamase expression; PFAM: N-acetylmuramoyl-L-alanine amidase.
  
  
 0.664
AFC85268.1
Hypothetical protein.
 
     0.659
AFC86993.1
Hypothetical protein.
  
     0.649
Your Current Organism:
Frateuria aurantia
NCBI taxonomy Id: 767434
Other names: F. aurantia DSM 6220, Frateuria aurantia DSM 6220, Frateuria aurantia IFO 3245, Frateuria aurantia str. DSM 6220, Frateuria aurantia strain DSM 6220
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