STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFC85335.1Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. (812 aa)    
Predicted Functional Partners:
AFC86852.1
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region.
  
  
 0.927
AFC86656.1
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family.
  
  
 
0.908
AFC86654.1
PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family.
  
  
 
0.907
AFC84710.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase; FAD dependent oxidoreductase.
 
   
 0.900
AFC85411.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
 
   
 0.900
AFC86254.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
 
   
 0.900
AFC86652.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
 
   
 0.900
AFC84883.1
PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.807
pgi
PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
     
 0.807
pgi-2
PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
     
 0.807
Your Current Organism:
Frateuria aurantia
NCBI taxonomy Id: 767434
Other names: F. aurantia DSM 6220, Frateuria aurantia DSM 6220, Frateuria aurantia IFO 3245, Frateuria aurantia str. DSM 6220, Frateuria aurantia strain DSM 6220
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