STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFC85925.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
AFC85927.1
Putative phage Mu protein gp47-like protein.
 
 
   0.964
AFC85928.1
PFAM: Protein of unknown function (DUF2612).
 
    0.958
AFC85924.1
Hypothetical protein.
 
     0.950
AFC85921.1
PFAM: Phage-related minor tail protein.
 
     0.946
AFC85918.1
PFAM: Protein of unknown function (DUF3383).
 
     0.874
AFC85912.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2184).
 
     0.867
AFC85910.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2213).
 
     0.836
AFC85926.1
Hypothetical protein.
       0.800
AFC85467.1
Phage baseplate assembly protein W; PFAM: Gene 25-like lysozyme.
  
 
 0.787
AFC85922.1
Hypothetical protein.
       0.787
Your Current Organism:
Frateuria aurantia
NCBI taxonomy Id: 767434
Other names: F. aurantia DSM 6220, Frateuria aurantia DSM 6220, Frateuria aurantia IFO 3245, Frateuria aurantia str. DSM 6220, Frateuria aurantia strain DSM 6220
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.