STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUG53292.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
KUG53293.1
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.997
KUG53294.1
Acetylglucosamine-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
KUG52830.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.905
KUG53278.1
Nucleotide sugar dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
  0.872
KUG53291.1
Glycosyltransferase WbuB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.823
lysS
lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.742
KUG53287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.707
KUG57244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.675
KUG53761.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.670
KUG57223.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.664
Your Current Organism:
Serinicoccus chungangensis
NCBI taxonomy Id: 767452
Other names: CCUG 59777, KCTC 19774, S. chungangensis, Serinicoccus chungangensis Traiwan et al. 2011, Serinicoccus sp. CAU 9536, strain CAU 9536
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