STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUG58293.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
AVL62_10205
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.803
KUG58292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.795
KUG58294.1
Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
KUG54493.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.687
KUG58289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.514
KUG58488.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.481
KUG58288.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.456
AVL62_10145
Molybdopterin synthase sulfur carrier subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.427
KUG58291.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.427
narY
Nitrate reductase; With NarZV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.409
Your Current Organism:
Serinicoccus chungangensis
NCBI taxonomy Id: 767452
Other names: CCUG 59777, KCTC 19774, S. chungangensis, Serinicoccus chungangensis Traiwan et al. 2011, Serinicoccus sp. CAU 9536, strain CAU 9536
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