STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR92824.1PAS domain S-box-containing protein. (498 aa)    
Predicted Functional Partners:
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.966
SFR98402.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 
 0.962
SFR98396.1
Chemotaxis protein methyltransferase CheR.
 
 
 
 0.948
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
 
  0.947
SFR98456.1
Two-component system, chemotaxis family, response regulator CheY.
  
  
  0.929
SFR87409.1
Purine-binding chemotaxis protein CheW.
  
 0.907
SFR94242.1
Purine-binding chemotaxis protein CheW.
  
 0.907
SFR98413.1
CheW protein.
  
 0.907
SFS06691.1
Methyl-accepting chemotaxis protein.
  
 0.878
SFS12258.1
Methyl-accepting chemotaxis protein.
  
 0.878
Your Current Organism:
Halomicrobium zhouii
NCBI taxonomy Id: 767519
Other names: CGMCC 1.10457, H. zhouii, Halobacteriaceae archaeon TBN51, Halomicrobium zhouii Yang and Cui 2012, JCM 17095, strain TBN51
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