Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFR96620.1Replication factor A1. (525 aa)    
Predicted Functional Partners:
SFR96616.1
Archaeal histone-like protein.
 
    0.941
pcn
Monomeric archaeal DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
  
 0.929
radA
DNA repair protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
 
 0.897
SFR96614.1
Acetoin utilization deacetylase AcuC.
   
   0.896
SFR86924.1
Replicative DNA helicase Mcm; Belongs to the MCM family.
  
 0.874
SFS07692.1
Hypothetical protein.
  
 
 0.858
SFR86093.1
Fanconi anemia group M protein.
  
 
  0.787
SFR98245.1
ATP-dependent DNA helicase, RecQ-like.
   
 0.766
priL
DNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.
  
 0.678
SFR92613.1
Uncharacterized membrane protein, DUF106 family.
  
     0.678
Your Current Organism:
Halomicrobium zhouii
NCBI taxonomy Id: 767519
Other names: CGMCC 1.10457, H. zhouii, Halobacteriaceae archaeon TBN51, Halomicrobium zhouii Yang and Cui 2012, JCM 17095, strain TBN51
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