Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMA44666.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (970 aa)    
Predicted Functional Partners:
AMA44668.1
Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.
       0.921
AMA44667.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
AMA46638.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
AMA44879.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.525
AMA47699.1
Dodecin flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.498
AMA47343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.471
AMA45508.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.453
AMA45179.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.450
AMA44126.1
Cell wall assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
       0.428
Your Current Organism:
Pseudomonas monteilii
NCBI taxonomy Id: 76759
Other names: ATCC 700476, CCUG 38736, CFML 90-60, CIP 104883, DSM 14164, JCM 21585, NBRC 103158, P. monteilii, Pseudomonas sp. MKP 213, Pseudomonas sp. V7SW2
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