STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMA44774.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)    
Predicted Functional Partners:
AMA47367.1
GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
AMA46718.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
AMA44859.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.632
AMA47660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
AMA46638.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
AMA44904.1
H-NS histone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
AMA47026.1
Nucleoid-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
AMA45212.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
AMA47034.1
Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
AMA45006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
Your Current Organism:
Pseudomonas monteilii
NCBI taxonomy Id: 76759
Other names: ATCC 700476, CCUG 38736, CFML 90-60, CIP 104883, DSM 14164, JCM 21585, NBRC 103158, P. monteilii, Pseudomonas sp. MKP 213, Pseudomonas sp. V7SW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.