STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMA45142.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (385 aa)    
Predicted Functional Partners:
AMA45141.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
AMA45140.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
macB
Macrolide ABC transporter ATP-binding protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.949
AMA45143.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.937
AMA45856.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.935
AMA46316.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
AMA45855.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.852
AMA46424.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.850
AMA47129.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.840
AMA46031.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.839
Your Current Organism:
Pseudomonas monteilii
NCBI taxonomy Id: 76759
Other names: ATCC 700476, CCUG 38736, CFML 90-60, CIP 104883, DSM 14164, JCM 21585, NBRC 103158, P. monteilii, Pseudomonas sp. MKP 213, Pseudomonas sp. V7SW2
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