Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMA47859.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit; Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.904
AMA46030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.552
AMA45609.1
DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.545
AMA47338.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
AMA45902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.521
APT63_14095
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.512
AMA44308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.510
AMA46971.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
AMA44736.1
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.497
AMA44738.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
Your Current Organism:
Pseudomonas monteilii
NCBI taxonomy Id: 76759
Other names: ATCC 700476, CCUG 38736, CFML 90-60, CIP 104883, DSM 14164, JCM 21585, NBRC 103158, P. monteilii, Pseudomonas sp. MKP 213, Pseudomonas sp. V7SW2
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