STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMA46204.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (289 aa)    
Predicted Functional Partners:
AMA46205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.991
AMA46200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.886
AMA45897.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.754
AMA46809.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.752
AMA47627.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.731
AMA47868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.702
AMA45653.1
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.686
AMA46435.1
Iron utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.677
AMA47037.1
ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.667
potA-2
Transporter; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
     
0.649
Your Current Organism:
Pseudomonas monteilii
NCBI taxonomy Id: 76759
Other names: ATCC 700476, CCUG 38736, CFML 90-60, CIP 104883, DSM 14164, JCM 21585, NBRC 103158, P. monteilii, Pseudomonas sp. MKP 213, Pseudomonas sp. V7SW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.