STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMA46513.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)    
Predicted Functional Partners:
AMA46339.1
Ornithine monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.964
APT63_12830
Non-ribosomal peptide synthetase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
AMA46431.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
APT63_19315
2,4-diaminobutyrate 4-aminotransferase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.903
AMA45642.1
Rhizobactin siderophore biosynthesis protein RhbE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.885
AMA46511.1
Non-ribosomal peptide synthetase; Catalyzes the specific recognition and activation of amino acids during peptide synthesis; involved in the biosynthesis of the peptide chain of pyoverdines; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.736
AMA46426.1
Cyclic peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.713
AMA44947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.661
AMA44788.1
Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.632
AMA47899.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.614
Your Current Organism:
Pseudomonas monteilii
NCBI taxonomy Id: 76759
Other names: ATCC 700476, CCUG 38736, CFML 90-60, CIP 104883, DSM 14164, JCM 21585, NBRC 103158, P. monteilii, Pseudomonas sp. MKP 213, Pseudomonas sp. V7SW2
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