STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL01445.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
folE
PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I.
       0.859
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.854
AGL01914.1
Hypothetical protein.
  
     0.701
AGL01958.1
Hypothetical protein.
  
     0.676
AGL01236.1
Hypothetical protein.
  
     0.668
AGL01338.1
Hypothetical protein.
  
     0.613
AGL00892.1
Hypothetical protein.
  
     0.547
AGL01348.1
Hypothetical protein.
  
     0.514
AGK99801.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.489
AGL01621.1
Hypothetical protein.
  
     0.469
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.