STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL01600.1Putative transcriptional regulator; PFAM: Helix-turn-helix. (83 aa)    
Predicted Functional Partners:
AGL01599.1
PFAM: Uncharacterised protein family (UPF0150).
 
     0.805
AGL01598.1
Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein.
 
     0.804
AGL02974.1
Putative transcriptional regulator.
  
     0.674
AGL00979.1
Hypothetical protein.
  
     0.496
AGL01601.1
Hypothetical protein.
       0.484
AGL01438.1
Galactose-1-phosphate uridylyltransferase.
  
     0.461
AGL02072.1
Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: 4Fe-4S binding domain.
  
     0.456
AGL00108.1
Hypothetical protein.
  
     0.442
AGL00107.1
PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6.
  
     0.419
AGL00110.1
PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/HMARI; CRISPR-associated protein Cas5, N-terminal domain.
  
     0.402
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.