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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL02560.1Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family. (119 aa)    
Predicted Functional Partners:
AGL02559.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.975
AGL02561.1
Hypothetical protein.
 
    0.928
AGL03291.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.719
AGK99827.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.704
AGL03378.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.674
AGL02794.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.637
AGL01637.1
Flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins.
   
    0.633
AGK99828.1
Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
  
     0.607
AGL00431.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.564
AGL00432.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
  
 0.564
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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