STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL02562.1Putative ABC-type exoprotein transport system, permease component; PFAM: Bacterial ABC transporter protein EcsB. (409 aa)    
Predicted Functional Partners:
AGL02563.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.944
AGK99831.1
Hypothetical protein.
  
     0.684
AGL00979.1
Hypothetical protein.
 
     0.557
AGK99717.1
Hypothetical protein; Manually curated.
  
     0.491
AGL03142.1
Hypothetical protein; PFAM: Bacterial membrane flanked domain.
   
    0.483
AGL01687.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.473
AGL02264.1
PFAM: NfeD-like.
   
    0.466
AGK99827.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.465
AGL00843.1
Membrane-bound serine protease (ClpP class); PFAM: NfeD-like.
   
    0.465
AGL01693.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.464
Your Current Organism:
Desulfallas gibsoniae
NCBI taxonomy Id: 767817
Other names: D. gibsoniae DSM 7213, Desulfallas gibsoniae DSM 7213, Desulfotomaculum gibsoniae DSM 7213, Desulfotomaculum sp. DSM 7213, Desulfotomaculum sp. Groll
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.