STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW27317.1Secreted hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)    
Predicted Functional Partners:
ORW27316.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
       0.598
ORW29097.1
Mycofactocin system glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.550
ORW34006.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
AWB91_07285
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
ORW32825.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.509
ORW32894.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
ORW32411.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
ORW31902.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
ORW31703.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
ORW31062.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.509
Your Current Organism:
Mycobacterium paraense
NCBI taxonomy Id: 767916
Other names: CCUG 66121, DSM 46749, M. paraense, Mycobacterium paraense Fusco da Costa et al. 2015, Mycobacterium sp. FI-10043, Mycobacterium sp. IEC1883, Mycobacterium sp. IEC23, Mycobacterium sp. IEC24, Mycobacterium sp. IEC25, Mycobacterium sp. IEC26, Mycobacterium sp. IEC27, Mycobacterium sp. IEC28, Mycobacterium sp. IEC29, Mycobacterium sp. IEC30, Mycobacterium sp. IEC31, Mycobacterium sp. IEC32, Mycobacterium sp. IEC33, Mycobacterium sp. IEC34, strain IEC26
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