STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWB91_07450Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)    
Predicted Functional Partners:
ORW33403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
ORW33404.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
ORW33405.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
ORW27430.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
ORW33456.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.565
ORW33526.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.541
ORW30835.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
  0.540
ORW29550.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
  0.539
ORW33120.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.495
ORW27275.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
   
  0.480
Your Current Organism:
Mycobacterium paraense
NCBI taxonomy Id: 767916
Other names: CCUG 66121, DSM 46749, M. paraense, Mycobacterium paraense Fusco da Costa et al. 2015, Mycobacterium sp. FI-10043, Mycobacterium sp. IEC1883, Mycobacterium sp. IEC23, Mycobacterium sp. IEC24, Mycobacterium sp. IEC25, Mycobacterium sp. IEC26, Mycobacterium sp. IEC27, Mycobacterium sp. IEC28, Mycobacterium sp. IEC29, Mycobacterium sp. IEC30, Mycobacterium sp. IEC31, Mycobacterium sp. IEC32, Mycobacterium sp. IEC33, Mycobacterium sp. IEC34, strain IEC26
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