Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORW33086.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
ORW33085.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.806
ORW33084.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.803
ORW33083.1
4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
ORW33082.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
ORW33081.1
Polyketide cyclase / dehydrase and lipid transport; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
Your Current Organism:
Mycobacterium paraense
NCBI taxonomy Id: 767916
Other names: CCUG 66121, DSM 46749, M. paraense, Mycobacterium paraense Fusco da Costa et al. 2015, Mycobacterium sp. FI-10043, Mycobacterium sp. IEC1883, Mycobacterium sp. IEC23, Mycobacterium sp. IEC24, Mycobacterium sp. IEC25, Mycobacterium sp. IEC26, Mycobacterium sp. IEC27, Mycobacterium sp. IEC28, Mycobacterium sp. IEC29, Mycobacterium sp. IEC30, Mycobacterium sp. IEC31, Mycobacterium sp. IEC32, Mycobacterium sp. IEC33, Mycobacterium sp. IEC34, strain IEC26
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