STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW31903.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)    
Predicted Functional Partners:
ORW27392.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.927
ORW33784.1
Isocitrate dehydrogenase; NADP-specific, catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family.
  
 
 0.830
ORW31261.1
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.830
ORW32268.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.801
ORW31902.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.770
cysC
Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.755
ORW29379.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.749
ORW31904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.727
ORW31058.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.668
Your Current Organism:
Mycobacterium paraense
NCBI taxonomy Id: 767916
Other names: CCUG 66121, DSM 46749, M. paraense, Mycobacterium paraense Fusco da Costa et al. 2015, Mycobacterium sp. FI-10043, Mycobacterium sp. IEC1883, Mycobacterium sp. IEC23, Mycobacterium sp. IEC24, Mycobacterium sp. IEC25, Mycobacterium sp. IEC26, Mycobacterium sp. IEC27, Mycobacterium sp. IEC28, Mycobacterium sp. IEC29, Mycobacterium sp. IEC30, Mycobacterium sp. IEC31, Mycobacterium sp. IEC32, Mycobacterium sp. IEC33, Mycobacterium sp. IEC34, strain IEC26
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