STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sIR2NAD-dependent deacetylase; High confidence in function and specificity. (292 aa)    
Predicted Functional Partners:
HELO_1141
Hypothetical protein; tRNA pseudouridine synthase D - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039),InterPro: Protein of unknown function YGGT, Hypothetical protein.
       0.777
HELO_4099
Cytochrome P450; Fatty acid synthase - Bos taurus (Bovine),InterPro: Cytochrome P450, High confidence in function and specificity.
   
 0.667
ldh
Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Leucine dehydrogenase - Bacillus stearothermophilus (Geobacillus stearothermophilus),InterPro: Glu/Leu/Phe/Val dehydrogenase C terminal, Specificity unclear; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.649
nadR
Bifunctional NMN adenylyltransferase/Nudix hydrolase [Includes: Nicotinamide-nucleotide adenylyltransferase -Synechocystis sp. (strain PCC 6803),InterPro: Cytidylyltransferase, High confidence in function and specificity.
  
  
 0.507
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 
 0.476
yfiQ
K09181 hypothetical protein; Uncharacterized protein yfiQ - Escherichia coli (strain K12),InterPro: CoA-binding domain, High confidence in function and specificity.
  
  
 0.469
ymdB
Appr-1-p processing domain protein; UPF0189 protein LA_4133 - Leptospira interrogans,InterPro: Protein of unknown function Appr-1,Specificity unclear.
 
 
 0.443
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.