STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_1613Ion transport protein; Potassium voltage-gated channel subfamily G member 2 - Gallus gallus (Chicken),InterPro: Cation channel non-ligand gated, Specificity unclear. (294 aa)    
Predicted Functional Partners:
ygiF
Adenylate cyclase; Uncharacterized protein ygiF - Escherichia coli (strain K12),InterPro: Adenylate cyclase, High confidence in function and specificity.
       0.843
HELO_1615
K07220 hypothetical protein; UPF0111 protein CPn_0681/CP_0066/CPj0681/CpB0708 -Chlamydia pneumoniae (Chlamydophila pneumoniae),InterPro: Protein of unknown function DUF47, High confidence in function and specificity.
  
    0.743
HELO_1616
K03306 inorganic phosphate transporter, PiT family; Putative phosphate permease PYRAB14010 - Pyrococcus abyssi,InterPro: Phosphate transporter, High confidence in function and specificity.
  
    0.695
trkH
Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Probably interacts with Trk system potassium uptake protein TrkA.
  
 
 0.561
trkI
Trk system potassium uptake protein TrkI; Medium-affinity potassium transport system. Probably interacts with Trk system potassium uptake protein TrkA. Main K(+) transporter in osmotically adapted cells.
  
 
 0.561
moaE
K03635 molybdenum cofactor biosynthesis protein E; Molybdopterin-converting factor subunit 2 -Pseudomonas aeruginosa,InterPro: Molybdopterin biosynthesis MoaE, High confidence in function and specificity.
   
    0.497
kefB
K03455 monovalent cation:H+ antiporter-2, CPA2 family; Glutathione-regulated potassium-efflux system protein kefB - Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696),InterPro: Sodium/hydrogen exchanger, High confidence in function and specificity; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.454
hemD
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.451
sun
K03500 Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
    0.437
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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