STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_1626Putative two-component response regulator protein (transcriptional regulator), TctD-like protein. (222 aa)    
Predicted Functional Partners:
HELO_1627
Two-component sensor hisitidine kinase, TctE-like protein.
 
 0.997
HELO_2265
Sensor protein qseC - Escherichia coli (strain K12),InterPro: Histidine kinase, Specificity unclear.
 
 0.983
gacS
Signal transduction histidine-protein kinase barA -Shigella flexneri,InterPro: Histidine kinase, High confidence in function and specificity.
 
 
 0.910
HELO_2266
Putative two-component response regulator protein (transcriptional regulator), TctD-like protein.
  
  
 
0.907
HELO_3559
Probable two-component sensor; Phytochrome 1 - Selaginella martensii (Martenss spike moss),InterPro: Na+/solute symporter, Specificity unclear.
  
 
 0.896
HELO_3700
Hybrid signal transduction histidine kinase K -Dictyostelium discoideum (Slime mold),InterPro: Histidine kinase, Specificity unclear.
 
0.868
HELO_1576
Sensor histidine kinase; Sensor protein qseC - Escherichia coli O157:H7,InterPro: Histidine kinase, Specificity unclear.
 
 
 0.844
HELO_2840
Signal transduction histidine-protein kinase arlS -Staphylococcus haemolyticus (strain JCSC1435),InterPro: Histidine kinase, Specificity unclear.
 
 
 0.838
HELO_1628
ABC-type transport system periplasmic substrate-binding protein.
 
     0.832
HELO_4320
Sensor protein gacS - Pseudomonas syringae pv. syringae,InterPro: Histidine kinase, Specificity unclear.
 
 0.831
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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