STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betBBetaine aldehyde dehydrogenase BetB; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid. (489 aa)    
Predicted Functional Partners:
betA
Choline dehydrogenase BetA; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
 
 0.992
HELO_3241
Glucose-methanol-choline oxidoreductase; Choline dehydrogenase - Serratia proteamaculans (strain 568),InterPro: Glucose-methanol-choline oxidoreductase, Specificity unclear.
 
 0.967
betI
Transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
  
 0.958
HELO_2768
Aldehyde dehydrogenase mitochondrial precursor -Pongo pygmaeus (Bornean orangutan),InterPro: Aldehyde dehydrogenase, Specificity unclear.
  
  
 
0.913
HELO_1294
Retinal dehydrogenase 1 - Homo sapiens (Human),InterPro: Aldehyde dehydrogenase, Specificity unclear; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.911
HELO_1862
ABC-type transport system periplasmic substrate-binding protein.
 
     0.782
fadE
Acyl-coenzyme A dehydrogenase - Salmonella typhimurium,InterPro: Acyl-CoA dehydrogenase C-terminal,High confidence in function and specificity.
  
   0.671
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
      0.544
ectB
Diaminobutyrate--2-oxoglutarateaminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate. Seems to use L-glutamate specifically as the amino group donor to ASA, as it is not active with L-alanine, L-glutamine, L- aspartate and L-lysine, and is only poorly active with L-homoserine. In the reverse reaction, gamma-aminobutyric acid (GABA) and L-ornithine can also be used as amino group donors to 2-oxoglutarate, but with a reduced activity compared to that with DABA. Belongs to the class [...]
   
 
 0.413
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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