STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_2064Oligopeptidase B; Protease 2 - Moraxella lacunata,InterPro: Peptidase S9 prolyl oligopeptidase N-terminal beta-propeller domain,High confidence in function and specificity. (695 aa)    
Predicted Functional Partners:
HELO_2065
Hypothetical protein predicted by Glimmer/Critica.
       0.774
HELO_2066
Lipoate-protein ligase A - Vibrio cholerae (strain ATCC 39541 / O395),InterPro: von Willebrand factor type A,Hypothetical protein.
       0.571
HELO_2153
Hypothetical protein; Thiol-disulfide oxidoreductase resA - Geobacillus thermodenitrificans (strain NG80-2),InterPro: Thioredoxin domain 2, Specificity unclear.
 
      0.431
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.