STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chuSHemin transport protein hemS - Yersinia enterocolitica,InterPro: Haemin-degrading, High confidence in function and specificity. (352 aa)    
Predicted Functional Partners:
hmuT
ABC-type transport system periplasmic substrate-binding protein.
 
  
 0.996
hmuU
ABC-type transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.945
hmuV
ABC-type transport system ATP-binding protein.
   
 0.935
chuA
Outer membrane heme/hemoglobin receptor; Hemin receptor precursor - Yersinia pestis,InterPro: TonB-dependent receptor protein, High confidence in function and specificity.
 
  
 0.933
HELO_2412
Hypothetical protein predicted by Glimmer/Critica; Hemin uptake protein hemP - Yersinia enterocolitica,Conserved hypothetical protein.
  
  
 0.607
gltB
Glutamate synthase (NADPH), large subunit; Catalyzes the conversion of L-glutamine and 2-oxoglutarate into two molecules of L-glutamate.
       0.525
mxcB
Uncharacterized protein yqjH - Escherichia coli (strain K12),InterPro: Siderophore-interacting protein,High confidence in function and specificity.
 
    0.488
yiuR
K02014 iron complex outermembrane recepter protein; High confidence in function and specificity.
 
  
 0.422
HELO_4155
ABC-type transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.420
btuC
ABC-type transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.413
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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