STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_2495Hypothetical protein. (379 aa)    
Predicted Functional Partners:
HELO_2494
Secretion protein HlyD family protein; P-hydroxybenzoic acid efflux pump subunit aaeA -Escherichia coli O139:H28 (strain E24377A / ETEC),InterPro: Secretion protein HlyD, Specificity unclear.
 
     0.970
rna
Ribonuclease I precursor - Escherichia coli (strain K12),InterPro: Ribonuclease T2, High confidence in function and specificity; Belongs to the RNase T2 family.
  
     0.683
HELO_1748
Hypothetical protein predicted by Glimmer/Critica; Roundabout homolog 2 precursor - Homo sapiens (Human), Hypothetical protein.
  
     0.653
HELO_4224
TRAP transporter small transmembrane protein (tripartite ATP-independent periplasmic transporter; DctQ component).
  
     0.554
HELO_2493
Hypothetical protein predicted by Glimmer/Critica.
       0.488
HELO_2496
Hypothetical protein predicted by Glimmer/Critica.
       0.471
HELO_3603
Uncharacterized transporter yyaM - Bacillus subtilis,InterPro: Protein of unknown function DUF6,Specificity unclear.
  
     0.448
HELO_4123
Hypothetical protein.
  
     0.414
HELO_2446
Hypothetical protein predicted by Glimmer/Critica; Uncharacterized 17.2 kDa protein in melC2-rnhH intergenic region - Streptomyces lincolnensis, Hypothetical protein.
  
     0.407
HELO_1821
Hypothetical protein predicted by Glimmer/Critica; Bifunctional adenosylcobalamin biosynthesis protein cobP [Includes: Adenosylcobinamide kinase - Pseudomonas aeruginosa, High confidence in function and specificity.
  
     0.406
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.