STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_2539Hypothetical protein. (253 aa)    
Predicted Functional Partners:
grxA
Glutaredoxin-1 - Salmonella typhi,InterPro: Glutaredoxin, High confidence in function and specificity.
 
     0.791
HELO_2440
Adenylate/guanylate cyclase; Uncharacterized protein R02095 - Rhizobium meliloti (Sinorhizobium meliloti), Specificity unclear.
  
     0.748
HELO_1141
Hypothetical protein; tRNA pseudouridine synthase D - Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039),InterPro: Protein of unknown function YGGT, Hypothetical protein.
  
     0.722
HELO_1793
Hypothetical protein.
  
     0.694
HELO_1322
Hypothetical protein predicted by Glimmer/Critica; Protein pucC - Rhodobacter capsulatus (Rhodopseudomonas capsulata), Hypothetical protein.
  
     0.678
HELO_2029
Hypothetical protein predicted by Glimmer/Critica.
  
     0.650
HELO_3875
Hypothetical protein; Plectin-1 - Cricetulus griseus (Chinese hamster),Specificity unclear.
  
     0.634
HELO_3884
Uncharacterized protein ydhA - Escherichia coli (strain K12), Hypothetical protein.
  
     0.634
nadR
Bifunctional NMN adenylyltransferase/Nudix hydrolase [Includes: Nicotinamide-nucleotide adenylyltransferase -Synechocystis sp. (strain PCC 6803),InterPro: Cytidylyltransferase, High confidence in function and specificity.
  
     0.627
suhB-2
Inositol-1(or 4)-monophosphatase; Inositol monophosphatase 3 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum),InterPro: Inositol monophosphatase, High confidence in function and specificity.
       0.626
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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