STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_2697ABC-type transport system permease protein. (357 aa)    
Predicted Functional Partners:
HELO_2698
ABC-type transport system permease protein.
  
 0.987
HELO_2699
ABC-type transport system ATP-binding protein; Contains 2 ATP-binding domains; Belongs to the ABC transporter superfamily.
  
 0.977
HELO_2696
ABC-type transport system periplasmic substrate-binding protein.
 
  
 0.969
HELO_3849
ABC-type transport system ATP-binding protein; Contains 2 ATP-binding domains; Belongs to the ABC transporter superfamily.
  
 0.841
HELO_2583
ABC-type transport system permease protein.
     0.697
HELO_2582
ABC-type transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.677
HELO_3848
ABC-type transport system permease protein.
     0.656
HELO_2581
Dipeptide transport ATP-binding protein dppF -Haemophilus influenzae,InterPro: ABC transporter, High confidence in function and specificity; Belongs to the ABC transporter superfamily.
   
 0.594
mltD
MLTD_N domain protein; Membrane-bound lytic murein transglycosylase D precursor - Escherichia coli O6,InterPro: SLT domain, High confidence in function and specificity.
       0.588
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
       0.467
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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