STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rciSite-specific recombinase, phage integrase family; Integrase - Bacteriophage 186,InterPro: Phage integrase, High confidence in function and specificity; Belongs to the 'phage' integrase family. (352 aa)    
Predicted Functional Partners:
HELO_3303
Hypothetical protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase -Lactobacillus casei (strain ATCC 334), Hypothetical protein.
       0.430
HELO_2378
Hypothetical protein; HTH-type transcriptional regulator sgrR -Photorhabdus luminescens subsp. laumondii,InterPro: TatD-related deoxyribonuclease, Hypothetical protein.
  
     0.419
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.