STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_3878Hypothetical protein predicted by Glimmer/Critica; Lamin-A/C - Sus scrofa (Pig),InterPro: Protein of unknown function DUF306, Hypothetical protein. (147 aa)    
Predicted Functional Partners:
HELO_2508
Hypothetical protein predicted by Glimmer/Critica; Coiled-coil domain-containing protein 105 - Mus musculus (Mouse), Hypothetical protein.
  
     0.591
HELO_3879
Uncharacterized protein yfiD - Bacillus subtilis,InterPro: DoxD-like protein, Specificity unclear.
       0.590
HELO_2440
Adenylate/guanylate cyclase; Uncharacterized protein R02095 - Rhizobium meliloti (Sinorhizobium meliloti), Specificity unclear.
  
     0.572
HELO_1821
Hypothetical protein predicted by Glimmer/Critica; Bifunctional adenosylcobalamin biosynthesis protein cobP [Includes: Adenosylcobinamide kinase - Pseudomonas aeruginosa, High confidence in function and specificity.
  
     0.548
HELO_3125
Hypothetical protein.
  
     0.527
vasC
K07169 FHA domain-containing protein; Genome polyprotein [Contains: P1 proteinase - Bean common mosaic necrosis virus (strain NL-3) (BCMNV) (Bean common mosaic virus serotype A (strain NL-3)), Hypothetical protein.
  
     0.525
HELO_2539
Hypothetical protein.
  
     0.501
HELO_1168
TRAP transporter (tripartite ATP-independent periplasmic transporter), small transmembrane protein (DctQ component), substrate unknown.
  
     0.493
HELO_3045
Hypothetical protein predicted by Glimmer/Critica; Protein disulfide-isomerase precursor - Gallus gallus (Chicken), Hypothetical protein.
  
     0.492
HELO_2314
UPF0251 protein MTH_1178 - Methanobacterium thermoautotrophicum, Hypothetical protein.
  
     0.487
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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