STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_4048Hypothetical protein predicted by Glimmer/Critica. (167 aa)    
Predicted Functional Partners:
HELO_4044
Hypothetical protein predicted by Glimmer/Critica.
       0.757
tfc3
Regulator of G-protein signaling 9-binding protein -Danio rerio (Zebrafish) (Brachydanio rerio), Hypothetical protein.
       0.757
tfc4
Lytic transglycosylase, catalytic; Forkhead box protein L1 - Mus musculus (Mouse),Hypothetical protein.
       0.757
tfc5
Hypothetical protein; S-adenosylmethionine:tRNA ribosyltransferase-isomerase - Vibrio parahaemolyticus,Specificity unclear.
       0.757
pilL
K02487 type IV pili sensor histidine kinase/response regulator; Ephrin-A1 precursor - Homo sapiens (Human),Hypothetical protein.
       0.741
HELO_4043
Hypothetical protein predicted by Glimmer/Critica; Lamin-A - Xenopus laevis (African clawed frog),Hypothetical protein.
       0.741
HELO_4049
Hypothetical protein predicted by Glimmer/Critica.
       0.581
tfc6
Hypothetical protein; Dihydroxy-acid dehydratase - Mycobacterium sp. (strain JLS), Hypothetical protein.
       0.581
tfc7
Hypothetical protein; C-C chemokine receptor-like 2 - Mus musculus (Mouse), Hypothetical protein.
       0.566
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.