STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheWChemotaxis protein cheW - Salmonella typhimurium,InterPro: CheW-like protein, High confidence in function and specificity. (165 aa)    
Predicted Functional Partners:
cheB
Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.999
tsr
Methyl-accepting chemotaxis protein I - Escherichia coli (strain K12),InterPro: Bacterial chemotaxis sensory transducer, High confidence in function and specificity.
 
 0.999
HELO_4340
Methyl-accepting chemotaxis protein 4 - Thermotoga maritima,InterPro: Bacterial chemotaxis sensory transducer,High confidence in function and specificity.
 
 0.999
cheA
Chemotaxis protein cheA - Salmonella typhimurium,InterPro: Histidine kinase, High confidence in function and specificity.
 
 0.999
tar1
Methyl-accepting chemotaxis protein mcpA - Bacillus subtilis,InterPro: Bacterial chemotaxis sensory transducer,High confidence in function and specificity.
 
 0.997
cheR
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
  
 0.995
HELO_4338
Methyl-accepting chemotaxis serine transducer -Enterobacter aerogenes (Aerobacter aerogenes),InterPro: Bacterial chemotaxis sensory transducer, High confidence in function and specificity.
 
 
 0.991
motB
Chemotaxis protein motB - Escherichia coli O157:H7,InterPro: OmpA/MotB domain, High confidence in function and specificity.
 
  
 0.991
cheZ
K03414 chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
  
 0.976
motA
Chemotaxis protein motA - Salmonella typhimurium,InterPro: Flagellar motor protein MotA, High confidence in function and specificity.
  
  
 0.965
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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