STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motAChemotaxis protein motA - Salmonella typhimurium,InterPro: Flagellar motor protein MotA, High confidence in function and specificity. (290 aa)    
Predicted Functional Partners:
motB
Chemotaxis protein motB - Escherichia coli O157:H7,InterPro: OmpA/MotB domain, High confidence in function and specificity.
 
 0.999
fliF
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.974
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.974
flgK
Flagellar hook-associated protein 1 - Escherichia coli (strain K12),InterPro: Flagellar basal body rod protein, High confidence in function and specificity.
 
  
 0.973
flgC
Flagellar basal-body rod protein flgC - Yersinia enterocolitica,InterPro: Flagellar basal-body rod protein FlgC, High confidence in function and specificity; Belongs to the flagella basal body rod proteins family.
 
  
 0.968
cheA
Chemotaxis protein cheA - Salmonella typhimurium,InterPro: Histidine kinase, High confidence in function and specificity.
  
  
 0.967
fliG
Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.966
cheW
Chemotaxis protein cheW - Salmonella typhimurium,InterPro: CheW-like protein, High confidence in function and specificity.
  
  
 0.965
fliS
Flagellar protein fliS - Salmonella typhimurium,InterPro: Flagellar protein FliS, High confidence in function and specificity.
 
  
 0.962
flgG
Flagellar basal-body rod protein flgG - Salmonella typhi,InterPro: Flagellar basal body rod protein, High confidence in function and specificity; Belongs to the flagella basal body rod proteins family.
 
  
 0.960
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.