STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU24776.1Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. (113 aa)    
Predicted Functional Partners:
ALU26573.1
Arsenical pump-driving ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.567
ALU24775.1
CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
ALU24774.1
O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.557
ALU24777.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
glsA
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.
       0.537
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.520
ALU24887.1
Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.453
ALU24875.1
PhnA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.419
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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