STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU28249.1ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)    
Predicted Functional Partners:
ALU24834.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
AS202_17880
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.599
ALU26595.1
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.594
ALU26637.1
Deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.594
ALU26634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.593
ALU27414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.593
ALU24947.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.585
ALU24835.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.563
ALU25541.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.518
ALU27751.1
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.506
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.