Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ALU24980.1Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. (237 aa)    
Predicted Functional Partners:
ALU26901.1
Dihydropteridine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.
  
  
 0.966
ALU24982.1
Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
ALU24981.1
Nitric oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.915
ALU24979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.875
ALU24976.1
Nitrite reductase, copper-containing; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.602
ALU25553.1
Flavodoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.579
ALU24978.1
Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
ALU27183.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.401
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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