STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU26006.1Ubiquinone biosynthesis protein UbiA; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)    
Predicted Functional Partners:
ALU25419.1
Polyprenyl synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
 
 
 0.871
ALU26005.1
Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.821
ALU27632.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.752
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.727
ALU26007.1
Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.684
ALU26366.1
Gliding motility-associated peptidyl-prolyl isomerase GldI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
ALU25694.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
ALU24758.1
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.635
ALU26225.1
PorT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.615
ALU25437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.608
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.