STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU26011.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)    
Predicted Functional Partners:
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
    0.808
ALU26753.1
Chromosome segregation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
ALU25637.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.541
ALU26012.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.527
ALU26009.1
4-hydroxybutyrate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.510
ALU26013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.490
ALU25598.1
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
ALU27093.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.473
ALU27001.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.435
ALU26006.1
Ubiquinone biosynthesis protein UbiA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.431
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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