STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU26246.1Gliding motility-associated ABC transporter ATP-binding subunit GldA; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
ALU27115.1
Gliding motility-associated ABC transporter permease subunit GldF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
ALU27116.1
Gliding motility-associated ABC transporter substrate-binding protein GldG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.839
ALU26456.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.724
ALU26247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
ALU26248.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
ALU26094.1
Gliding motility lipoprotein GldD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.564
ALU24964.1
Gliding motility lipoprotein GldJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.544
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.532
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.503
atpG
ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.502
Your Current Organism:
Myroides odoratimimus
NCBI taxonomy Id: 76832
Other names: CCUG 39352, CIP 105170, JCM 7460, LMG 4029, LMG:4029, M. odoratimimus, NCTC 11180
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.